EnhancerDB
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  3. rs149083160[chr2:26227122]
Enhancers that have rs149083160[chr2:26227122]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 26217845 26245475 enh18363
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs149083160[chr2:26227122]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 26227109 26227124 HNF1A JASPAR yes 72515365
chr2 26227113 26227126 POU3F3 JASPAR yes 72515366
chr2 26227113 26227127 POU1F1 JASPAR yes 72515367
chr2 26227114 26227126 POU3F1 JASPAR yes 72515368
chr2 26227114 26227126 POU3F2 JASPAR yes 72515369
chr2 26227115 26227122 NKX3-1 JASPAR yes 72515370
chr2 26227115 26227126 PHOX2A JASPAR yes 72515371
chr2 26227115 26227126 PROP1 JASPAR yes 72515372
chr2 26227118 26227131 DUXA JASPAR yes 72515373
chr2 26227119 26227130 DUX4 JASPAR yes 72515374
chr2 26227119 26227130 PHOX2A JASPAR yes 72515375
chr2 26227119 26227130 PROP1 JASPAR yes 72515376
chr2 26227120 26227130 PAX3 JASPAR yes 72515377
chr2 26227120 26227130 PAX7 JASPAR yes 72515378
chr2 26227122 26227132 GSX1 JASPAR yes 72515379
chr2 26227122 26227132 GSX2 JASPAR yes 72515380
chr2 26227122 26227132 LHX2 JASPAR yes 72515381
chr2 26227122 26227132 LHX6 JASPAR yes 72515382
chr2 26227122 26227132 MNX1 JASPAR yes 72515383
chr2 26227122 26227132 NOTO JASPAR yes 72515384
chr2 26227122 26227132 POU6F1 JASPAR yes 72515385
chr2 26227122 26227132 RAX JASPAR yes 72515386
Genes associated with rs149083160[chr2:26227122], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More