EnhancerDB
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  3. rs149128253[chr1:52023874]
Enhancers that have rs149128253[chr1:52023874]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 52012725 52027215 enh11846
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Stomach Placenta Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs149128253[chr1:52023874]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 52023863 52023874 TBX20 JASPAR yes 28850379
chr1 52023863 52023874 TBX2 JASPAR yes 28850380
chr1 52023863 52023876 EOMES JASPAR yes 28850381
chr1 52023864 52023874 TBR1 JASPAR yes 28850383
Genes associated with rs149128253[chr1:52023874], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More