EnhancerDB
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  3. rs149178397[chr12:50911522]
Enhancers that have rs149178397[chr12:50911522]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 50906745 50954311 enh2346
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs149178397[chr12:50911522]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 50911220 50911810 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21545019
chr12 50911220 50911810 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108031186
chr12 50911259 50911779 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21545020
chr12 50911259 50911779 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108031187
chr12 50911369 50911965 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21545021
chr12 50911369 50911965 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108031188
chr12 50911409 50911929 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21545022
chr12 50911409 50911929 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108031189
chr12 50911485 50911761 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21545023
chr12 50911485 50911761 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108031190
chr12 50911520 50911535 STAT1 JASPAR yes 120836914
Genes associated with rs149178397[chr12:50911522], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More