EnhancerDB
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  3. rs1492239[chr12:53264973]
Enhancers that have rs1492239[chr12:53264973]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 53249369 53285465 enh14733
Bone Marrow (K562) Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs1492239[chr12:53264973]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 53264754 53265339 TCF7L2 GTRD no Colon (HCT116) 108034420
chr12 53264826 53265396 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21547654
chr12 53264826 53265396 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108034421
chr12 53264872 53265342 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21547655
chr12 53264872 53265342 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108034422
chr12 53264964 53264975 E2F6 JASPAR yes 120957224
chr12 53264966 53264979 NFKB1 JASPAR yes 120957225
chr12 53264966 53264979 NFKB2 JASPAR yes 120957226
chr12 53264967 53264978 NFKB1 JASPAR yes 120957227
chr12 53264968 53264977 NF-kappaB TRANSFAC yes 120957228
chr12 53264968 53264978 NFKB1 JASPAR yes 120957229
chr12 53264968 53264978 RELA JASPAR yes 120957230
chr12 53264968 53264979 NFKB1 JASPAR yes 120957231
chr12 53264969 53264979 RELA JASPAR yes 120957232
chr12 53264969 53264979 REL JASPAR yes 120957233
chr12 53264973 53264979 MZF1 JASPAR yes 120957234
Genes associated with rs1492239[chr12:53264973], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More