EnhancerDB
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  3. rs149227379[chr17:49037162]
Enhancers that have rs149227379[chr17:49037162]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 49015225 49039275 enh17224
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs149227379[chr17:49037162]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 49037157 49037173 GLIS1 JASPAR yes 54739439
chr17 49037158 49037172 ZIC1 JASPAR yes 54739440
chr17 49037158 49037173 ZIC4 JASPAR yes 54739441
chr17 49037160 49037165 SP1 TRANSFAC yes 54739442
Genes associated with rs149227379[chr17:49037162], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More