EnhancerDB
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  3. rs149246442[chr12:50923270]
Enhancers that have rs149246442[chr12:50923270]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 50906745 50954311 enh2346
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs149246442[chr12:50923270]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 50923263 50923275 PBX1 JASPAR yes 120839018
chr12 50923264 50923279 HNF1A JASPAR yes 120839019
chr12 50923265 50923277 HNF1B JASPAR yes 120839020
chr12 50923265 50923278 HNF1B JASPAR yes 120839021
chr12 50923269 50923285 SOX8 JASPAR yes 120839022
Genes associated with rs149246442[chr12:50923270], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More