EnhancerDB
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  3. rs149284719[chr17:41525906]
Enhancers that have rs149284719[chr17:41525906]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 41518125 41539515 enh17169
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Kidney Prostate (RWPE1) Cervix (HeLa-S3) Esophagus Astrocyte Lung (A549) Stomach Placenta Thyroid Adrenal Lung (PC-9) Pancreas Spleen Muscle (Myotube) Uterus Heart
Transcript factors that have rs149284719[chr17:41525906]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 41520571 41526147 ZNF143 GTRD no Epithelial (MCF-7) 21760302
chr17 41520863 41526178 ZNF143 GTRD no Epithelial (MCF-7) 21760316
chr17 41523647 41525933 ZNF143 GTRD no Epithelial (MCF-7) 21760411
chr17 41523660 41526159 ZNF143 GTRD no Epithelial (MCF-7) 21760413
chr17 41524731 41526126 ZNF143 GTRD no Epithelial (MCF-7) 21760428
chr17 41525061 41526146 ZNF143 GTRD no Epithelial (MCF-7) 21760430
chr17 41525223 41526068 ZNF143 GTRD no Epithelial (MCF-7) 21760431
chr17 41525246 41526332 ZNF143 GTRD no Epithelial (MCF-7) 21760432
chr17 41525255 41526073 ZNF143 GTRD no Epithelial (MCF-7) 21760433
chr17 41525258 41526095 ZNF143 GTRD no Epithelial (MCF-7) 21760434
chr17 41525313 41526291 ZNF143 GTRD no Epithelial (MCF-7) 21760435
chr17 41525325 41526173 ZNF143 GTRD no Epithelial (MCF-7) 21760436
chr17 41525445 41526048 ZNF143 GTRD no Epithelial (MCF-7) 21760437
chr17 41525499 41526021 ZNF143 GTRD no Epithelial (MCF-7) 21760438
chr17 41525516 41526121 ZNF143 GTRD no Epithelial (MCF-7) 21760439
chr17 41525902 41525908 ZNF354C JASPAR yes 54348000
chr17 41525903 41525920 RXRA JASPAR yes 54348001
Genes associated with rs149284719[chr17:41525906], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More