EnhancerDB
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  3. rs149342729[chr1:232756277]
Enhancers that have rs149342729[chr1:232756277]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 232744026 232773755 enh12786
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Spleen Lung Muscle (A673) Heart
chr1 232753930 232757436 vista147
VISTA
Transcript factors that have rs149342729[chr1:232756277]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 232755987 232756851 KAP1 UCSC Txn Factor no Conserved 107686555
chr1 232756217 232756681 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21392292
chr1 232756276 232756290 GATA2 JASPAR yes 36178196
chr1 232756276 232756290 GATA2 JASPAR yes 71162777
Genes associated with rs149342729[chr1:232756277], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More