EnhancerDB
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  3. rs149354102[chr17:39810859]
Enhancers that have rs149354102[chr17:39810859]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 39800139 39815735 enh17152
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung (PC-9) Lung (A549) Stomach Placenta Colon (HCT116) Thyroid Muscle (Myoblast) Breast Muscle (Myotube) Uterus Thymus Epithelial (MCF-7)
Transcript factors that have rs149354102[chr17:39810859]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 39810847 39810861 GLIS2 JASPAR yes 54269018
chr17 39810856 39810866 NFKB1 JASPAR yes 54269019
chr17 39810856 39810867 NFKB1 JASPAR yes 54269020
Genes associated with rs149354102[chr17:39810859], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More