EnhancerDB
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  3. rs149364532[chr6:25003309]
Enhancers that have rs149364532[chr6:25003309]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 24994525 25030795 enh9006
Brain (SK-N-MC) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Spleen Muscle (Myotube) Prostate (RWPE1) Heart
Transcript factors that have rs149364532[chr6:25003309]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 25003302 25003314 GRHL1 JASPAR yes 100811966
chr6 25003306 25003320 FOXF2 JASPAR yes 100811967
chr6 25003307 25003315 FOXD1 JASPAR yes 100811968
chr6 25003307 25003315 FOXG1 JASPAR yes 100811969
chr6 25003307 25003315 FOXO3 JASPAR yes 100811970
chr6 25003308 25003315 FOXD2 JASPAR yes 100811971
chr6 25003308 25003315 FOXI1 JASPAR yes 100811972
chr6 25003308 25003315 FOXL1 JASPAR yes 100811973
chr6 25003308 25003315 FOXO4 JASPAR yes 100811974
chr6 25003308 25003315 FOXO6 JASPAR yes 100811975
chr6 25003308 25003315 FOXP3 JASPAR yes 100811976
chr6 25003308 25003318 HOXC10 JASPAR yes 100811977
chr6 25003308 25003318 HOXD11 JASPAR yes 100811978
chr6 25003308 25003319 HOXC11 JASPAR yes 100811979
chr6 25003308 25003319 HOXC12 JASPAR yes 100811980
chr6 25003308 25003319 HOXD12 JASPAR yes 100811981
chr6 25003309 25003327 IRF2 JASPAR yes 100811982
Genes associated with rs149364532[chr6:25003309], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More