EnhancerDB
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  3. rs149380427[chr17:55962770]
Enhancers that have rs149380427[chr17:55962770]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55962618 55979623 enh17245
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Lung Blood (GM12878) Stomach Placenta Colon (HCT116) Uterus Thyroid Adrenal Muscle (Myoblast) Pancreas Neural Stem Cells (H9) Heart
Transcript factors that have rs149380427[chr17:55962770]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55962762 55962779 PAX1 JASPAR yes 54994824
chr17 55962762 55962779 PAX9 JASPAR yes 54994825
Genes associated with rs149380427[chr17:55962770], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More