EnhancerDB
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  3. rs149404488[chr12:50926329]
Enhancers that have rs149404488[chr12:50926329]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 50906745 50954311 enh2346
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs149404488[chr12:50926329]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 50923339 50928617 ZNF274 GTRD no Bone Marrow (K562) 21545031
chr12 50923339 50928617 ZNF274 GTRD no Bone Marrow (K562) 108031199
chr12 50923339 50928617 ZNF274 GTRD no Bone Marrow (K562) 108031200
chr12 50926156 50926746 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21545154
chr12 50926156 50926746 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108031335
chr12 50926203 50926723 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21545155
chr12 50926203 50926723 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108031336
chr12 50926247 50926903 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21545156
chr12 50926247 50926903 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108031337
chr12 50926281 50926932 ZNF274 GTRD no Bone Marrow (K562) 21545157
chr12 50926281 50926932 ZNF274 GTRD no Bone Marrow (K562) 108031338
chr12 50926290 50926746 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21545158
chr12 50926290 50926746 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108031339
chr12 50926299 50926803 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21545159
chr12 50926299 50926803 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108031340
chr12 50926300 50926904 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21545160
chr12 50926300 50926904 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108031341
chr12 50926304 50926768 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21545161
chr12 50926304 50926768 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108031342
chr12 50926309 50926330 IRF1 JASPAR yes 120839480
chr12 50926323 50926873 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21545162
chr12 50926323 50926873 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108031343
Genes associated with rs149404488[chr12:50926329], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More