EnhancerDB
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  3. rs149436218[chr6:42259251]
Enhancers that have rs149436218[chr6:42259251]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 42254359 42267679 enh38998
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Blood (GM12878) Colon (HCT116) Muscle (Myoblast) Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Thymus Stomach
Transcript factors that have rs149436218[chr6:42259251]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 42259236 42259256 RREB1 JASPAR yes 101704886
chr6 42259241 42259261 RREB1 JASPAR yes 101704887
chr6 42259242 42259263 IRF1 JASPAR yes 101704888
chr6 42259243 42259258 FOXP1 JASPAR yes 101704890
chr6 42259246 42259258 IRF1 JASPAR yes 101704891
chr6 42259246 42259266 RREB1 JASPAR yes 101704892
chr6 42259248 42259254 TCF4 TRANSFAC yes 101704893
chr6 42259248 42259263 FOXP1 JASPAR yes 101704894
chr6 42259251 42259269 IRF2 JASPAR yes 101704895
Genes associated with rs149436218[chr6:42259251], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More