EnhancerDB
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  3. rs149469543[chr1:16502880]
Enhancers that have rs149469543[chr1:16502880]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 16486025 16524255 enh11545
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs149469543[chr1:16502880]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 16502868 16502889 IRF1 JASPAR yes 27031501
chr1 16502870 16502885 PRDM1 JASPAR yes 27031502
chr1 16502878 16502893 STAT2 JASPAR yes 27031503
chr1 16502879 16502893 STAT1 JASPAR yes 27031504
chr1 16502880 16502884 YY1 TRANSFAC yes 27031505
Genes associated with rs149469543[chr1:16502880], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More