EnhancerDB
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  3. rs149478204[chr12:50955399]
Enhancers that have rs149478204[chr12:50955399]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 50954380 50971535 enh2347
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Uterus Epithelial (MCF-7) Stomach Thyroid Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs149478204[chr12:50955399]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 50955392 50955406 POU4F1 JASPAR yes 120844061
chr12 50955392 50955408 POU4F3 JASPAR yes 120844062
chr12 50955395 50955410 HNF1A JASPAR yes 120844063
chr12 50955396 50955409 HNF1B JASPAR yes 120844064
chr12 50955396 50955410 ONECUT1 JASPAR yes 120844065
chr12 50955396 50955410 ONECUT2 JASPAR yes 120844066
chr12 50955396 50955410 ONECUT3 JASPAR yes 120844067
chr12 50955397 50955407 CUX1 JASPAR yes 120844068
chr12 50955397 50955407 CUX2 JASPAR yes 120844069
chr12 50955399 50955411 PBX1 JASPAR yes 120844070
Genes associated with rs149478204[chr12:50955399], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More