EnhancerDB
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  3. rs149540880[chr7:130003340]
Enhancers that have rs149540880[chr7:130003340]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr7 129988285 130007135 enh24509
Brain (SK-N-MC) Astrocyte Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs149540880[chr7:130003340]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr7 130003321 130003342 IRF1 JASPAR yes 18012256
Genes associated with rs149540880[chr7:130003340], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More