EnhancerDB
  1. Home
  2. SNP
  3. rs149578305[chr1:27477043]
Enhancers that have rs149578305[chr1:27477043]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27456674 27477960 enh171
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs149578305[chr1:27477043]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27477031 27477044 NFKB1 JASPAR yes 27682487
chr1 27477031 27477044 NFKB2 JASPAR yes 27682488
chr1 27477043 27477046 MYB TRANSFAC yes 27682489
Genes associated with rs149578305[chr1:27477043], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More