EnhancerDB
  1. Home
  2. SNP
  3. rs149612860[chr2:236552688]
Enhancers that have rs149612860[chr2:236552688]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 236541202 236558755 enh19368
Brain (SK-N-SH) Epithelial (MCF-7) Large Intestine Esophagus Astrocyte Bone (Osteoblast) Lung Stomach Muscle (A673) Placenta Thyroid Uterus Peripheral Blood (MM.1S) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Blood (T-cell) Heart
Transcript factors that have rs149612860[chr2:236552688]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 236552676 236552691 RFX5 JASPAR yes 81989355
chr2 236552684 236552699 ZIC3 JASPAR yes 81989356
chr2 236552684 236552699 ZIC4 JASPAR yes 81989357
chr2 236552685 236552699 GLIS2 JASPAR yes 81989358
chr2 236552685 236552699 GLIS3 JASPAR yes 81989359
chr2 236552685 236552699 ZIC1 JASPAR yes 81989360
chr2 236552686 236552692 SOX10 JASPAR yes 81989361
Genes associated with rs149612860[chr2:236552688], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More