EnhancerDB
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  3. rs149661941[chr12:107424730]
Enhancers that have rs149661941[chr12:107424730]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 107417025 107427075 enh14964
Brain (SK-N-MC) Astrocyte Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Thyroid Thymus Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Lung Heart
Transcript factors that have rs149661941[chr12:107424730]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 107423592 107425001 ZNF143 GTRD no Epithelial (MCF-7) 21570347
chr12 107423592 107425001 ZNF143 GTRD no Epithelial (MCF-7) 108056158
chr12 107424411 107424834 ZNF143 GTRD no Epithelial (MCF-7) 21570348
chr12 107424411 107424834 ZNF143 GTRD no Epithelial (MCF-7) 108056159
chr12 107424678 107425315 ZNF143 GTRD no Epithelial (MCF-7) 21570349
chr12 107424678 107425315 ZNF143 GTRD no Epithelial (MCF-7) 108056160
chr12 107424730 107424737 NKX3-1 JASPAR yes 123531223
Genes associated with rs149661941[chr12:107424730], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More