EnhancerDB
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  3. rs149666871[chr2:26240500]
Enhancers that have rs149666871[chr2:26240500]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 26217845 26245475 enh18363
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs149666871[chr2:26240500]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 26240495 26240504 SNAI2 JASPAR yes 72517277
chr2 26240495 26240505 ID4 JASPAR yes 72517278
chr2 26240495 26240505 MSC JASPAR yes 72517279
chr2 26240495 26240505 TCF3 JASPAR yes 72517280
chr2 26240495 26240505 TCF4 JASPAR yes 72517281
chr2 26240498 26240506 TBX15 JASPAR yes 72517282
chr2 26240498 26240506 TBX1 JASPAR yes 72517283
chr2 26240498 26240506 TBX4 JASPAR yes 72517284
chr2 26240498 26240506 TBX5 JASPAR yes 72517285
Genes associated with rs149666871[chr2:26240500], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More