EnhancerDB
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  3. rs149666899[chr1:1611007]
Enhancers that have rs149666899[chr1:1611007]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 1607365 1622353 enh2
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs149666899[chr1:1611007]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 1610994 1611007 SMAD2 JASPAR yes 26197996
chr1 1610997 1611007 TBR1 JASPAR yes 26197997
chr1 1610998 1611008 TBX21 JASPAR yes 26197998
chr1 1610999 1611007 MGA JASPAR yes 26197999
chr1 1610999 1611007 TBX15 JASPAR yes 26198000
chr1 1610999 1611007 TBX1 JASPAR yes 26198001
chr1 1610999 1611007 TBX4 JASPAR yes 26198002
chr1 1610999 1611007 TBX5 JASPAR yes 26198003
chr1 1610999 1611008 ZEB1 JASPAR yes 26198004
chr1 1610999 1611012 ZBTB18 JASPAR yes 26198005
chr1 1611000 1611010 FIGLA JASPAR yes 26198006
chr1 1611000 1611010 ID4 JASPAR yes 26198007
chr1 1611000 1611010 TCF3 JASPAR yes 26198008
chr1 1611000 1611010 TCF4 JASPAR yes 26198009
chr1 1611002 1611007 USF2 TRANSFAC yes 26198010
Genes associated with rs149666899[chr1:1611007], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More