EnhancerDB
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  3. rs149702378[chr12:46955553]
Enhancers that have rs149702378[chr12:46955553]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 46935165 46958895 enh14680
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Uterus Blood (T-cell) Kidney Epithelial (MCF-7) Skin (Keratinocyte) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs149702378[chr12:46955553]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 46955544 46955553 PITX3 JASPAR yes 120638465
chr12 46955544 46955554 GSC2 JASPAR yes 120638466
chr12 46955544 46955554 GSC JASPAR yes 120638467
chr12 46955545 46955553 OTX1 JASPAR yes 120638468
chr12 46955546 46955567 LUN1 TRANSFAC yes 120638469
Genes associated with rs149702378[chr12:46955553], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More