EnhancerDB
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  3. rs1497406[chr1:16505320]
Enhancers that have rs1497406[chr1:16505320]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 16486025 16524255 enh11545
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs1497406[chr1:16505320]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 16505310 16505320 GSC2 JASPAR yes 27031822
chr1 16505310 16505320 GSC JASPAR yes 27031823
chr1 16505311 16505320 PITX3 JASPAR yes 27031827
Genes associated with rs1497406[chr1:16505320], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More