EnhancerDB
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  3. rs149761171[chr1:25052458]
Enhancers that have rs149761171[chr1:25052458]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 25026945 25066186 enh139
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs149761171[chr1:25052458]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 25052447 25052459 E2F1 JASPAR yes 27523600
chr1 25052451 25052471 ESR1 JASPAR yes 27523601
chr1 25052457 25052472 HNF4A JASPAR yes 27523602
chr1 25052458 25052473 HNF4G JASPAR yes 27523603
Genes associated with rs149761171[chr1:25052458], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More