EnhancerDB
  1. Home
  2. SNP
  3. rs149852730[chr1:230328220]
Enhancers that have rs149852730[chr1:230328220]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 230319045 230337415 enh12771
Bone Marrow (K562) Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Lung Muscle (A673) Heart
Transcript factors that have rs149852730[chr1:230328220]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 230328205 230328226 IRF1 JASPAR yes 36032267
chr1 230328209 230328223 IRF7 JASPAR yes 36032268
chr1 230328212 230328227 LEF1 JASPAR yes 36032269
chr1 230328213 230328227 TCF7L2 JASPAR yes 36032270
chr1 230328216 230328222 LEF1 TRANSFAC yes 36032271
chr1 230328216 230328222 TCF4 TRANSFAC yes 36032272
Genes associated with rs149852730[chr1:230328220], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More