EnhancerDB
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  3. rs149852834[chr3:123324224]
Enhancers that have rs149852834[chr3:123324224]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 123311925 123328095 enh7496
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Stomach Muscle (A673) Placenta Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Pancreas (Panc1) Neural Stem Cells (H9) Epithelial (MCF-7)
chr3 123324068 123324437 vista42203
VISTA
Transcript factors that have rs149852834[chr3:123324224]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 123323997 123324343 CEBPB UCSC Txn Factor no Conserved 108530098
chr3 123324028 123324418 EP300 UCSC Txn Factor no Conserved 108530099
chr3 123324063 123324327 FOXA1 UCSC Txn Factor no Conserved 108530100
chr3 123324069 123324315 FOXA2 UCSC Txn Factor no Conserved 108530101
chr3 123324094 123324389 FOSL2 UCSC Txn Factor no Conserved 108530102
chr3 123324158 123324343 FOS UCSC Txn Factor no Conserved 108530103
chr3 123324219 123324229 GCM2 JASPAR yes 5329678
chr3 123324219 123324229 GCM2 JASPAR yes 71040992
chr3 123324219 123324230 GCM1 JASPAR yes 5329679
chr3 123324219 123324230 GCM1 JASPAR yes 71040993
chr3 123324224 123324228 LFA1 TRANSFAC yes 5329680
chr3 123324224 123324228 LFA1 TRANSFAC yes 71040994
Genes associated with rs149852834[chr3:123324224], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More