EnhancerDB
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  3. rs149866006[chr16:85341072]
Enhancers that have rs149866006[chr16:85341072]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85333005 85372015 enh16866
Bone Marrow (K562) Brain (SK-N-MC) Liver Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs149866006[chr16:85341072]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85340313 85341098 TCF7L2 GTRD no Colon (HCT116) 21723058
chr16 85340852 85341465 ZNF274 GTRD no Liver (HepG2) 21723064
chr16 85340925 85341389 ZNF274 GTRD no Bone Marrow (K562) 21723065
chr16 85340934 85341442 ZNF274 GTRD no Liver (HepG2) 21723066
chr16 85340936 85341489 ZNF143 GTRD no Epithelial (MCF-7) 21723067
chr16 85340988 85341444 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21723068
chr16 85341007 85341427 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21723069
chr16 85341045 85341499 ZNF274 GTRD no Liver (HepG2) 21723070
chr16 85341052 85341324 ZNF143 GTRD no Epithelial (MCF-7) 21723071
chr16 85341056 85341429 ZNF274 GTRD no Liver (HepG2) 21723072
chr16 85341058 85341342 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21723073
chr16 85341068 85341079 HOXA10 JASPAR yes 12045053
chr16 85341069 85341078 CDX1 JASPAR yes 12045054
chr16 85341069 85341080 CDX2 JASPAR yes 12045055
chr16 85341069 85341350 ZNF274 GTRD no Liver (HepG2) 21723074
Genes associated with rs149866006[chr16:85341072], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More