EnhancerDB
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Enhancers that have rs149877454[chr15:39483981]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 39472205 39509375 enh16053
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung (PC-9) Placenta Colon (HCT116) Uterus Thyroid Muscle (Myoblast) Pancreas Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs149877454[chr15:39483981]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 39483936 39484256 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21648194
chr15 39483936 39484256 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108132489
chr15 39483946 39484330 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21648195
chr15 39483946 39484330 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108132490
chr15 39483951 39484391 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21648196
chr15 39483951 39484391 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108132491
chr15 39483975 39484345 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21648197
chr15 39483975 39484345 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108132492
chr15 39483977 39483998 IRF1 JASPAR yes 22862353
Genes associated with rs149877454[chr15:39483981], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More