EnhancerDB
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  3. rs149879742[chr1:185615030]
Enhancers that have rs149879742[chr1:185615030]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 185611645 185629075 enh12480
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Blood (T-cell) Kidney Stomach Skin (Keratinocyte) Epithelial (MCF-7) Ovary Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs149879742[chr1:185615030]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 185614531 185615070 ZNF143 GTRD no Epithelial (MCF-7) 21359417
chr1 185614939 185615302 ZNF143 GTRD no Epithelial (MCF-7) 21359420
chr1 185614939 185615589 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21359421
chr1 185614939 185615589 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107852498
chr1 185615010 185615373 ZNF274 GTRD no Liver (HepG2) 21359422
chr1 185615013 185615276 ZNF143 GTRD no Epithelial (MCF-7) 21359423
Genes associated with rs149879742[chr1:185615030], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More