EnhancerDB
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  3. rs149896029[chr17:39057715]
Enhancers that have rs149896029[chr17:39057715]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 39055145 39077753 enh17145
Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Lung (A549) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs149896029[chr17:39057715]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 39056201 39057909 ZBTB33 GTRD no Lung (A549) 21757020
chr17 39056362 39057983 ZBTB33 GTRD no Lung (A549) 21757022
chr17 39056421 39057790 ZNF274 GTRD no Liver (HepG2) 21757023
chr17 39056599 39057779 ZBTB33 GTRD no Lung (A549) 21757033
chr17 39056632 39057805 ZNF143 GTRD no Epithelial (MCF-7) 21757037
chr17 39056751 39057859 TCF7L2 GTRD no Colon (HCT116) 21757053
chr17 39056792 39057898 TCF7L2 GTRD no Colon (HCT116) 21757056
chr17 39057053 39057806 TCF7L2 GTRD no Colon (HCT116) 21757065
chr17 39057500 39058026 ZBTB33 GTRD no Lung (A549) 21757069
chr17 39057705 39057724 CTCF JASPAR yes 54241882
chr17 39057710 39057719 SNAI2 JASPAR yes 54241884
chr17 39057710 39057720 ID4 JASPAR yes 54241885
chr17 39057710 39057720 TCF3 JASPAR yes 54241886
chr17 39057710 39057720 TCF4 JASPAR yes 54241887
Genes associated with rs149896029[chr17:39057715], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More