EnhancerDB
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  3. rs149900493[chr5:90602905]
Enhancers that have rs149900493[chr5:90602905]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 90595425 90613326 enh22427
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs149900493[chr5:90602905]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 90602886 90602906 RREB1 JASPAR yes 64190783
chr5 90602887 90602907 RREB1 JASPAR yes 64190784
chr5 90602890 90602905 RUNX2 JASPAR yes 64190785
chr5 90602890 90602911 IRF1 JASPAR yes 64190786
chr5 90602891 90602911 RREB1 JASPAR yes 64190787
chr5 90602892 90602907 IRF9 JASPAR yes 64190788
chr5 90602892 90602912 RREB1 JASPAR yes 64190789
chr5 90602893 90602907 IRF7 JASPAR yes 64190790
chr5 90602895 90602907 IRF1 JASPAR yes 64190791
chr5 90602895 90602910 RUNX2 JASPAR yes 64190792
chr5 90602895 90602916 IRF1 JASPAR yes 64190793
chr5 90602897 90602912 IRF9 JASPAR yes 64190794
chr5 90602897 90602917 RREB1 JASPAR yes 64190795
chr5 90602898 90602912 IRF7 JASPAR yes 64190796
chr5 90602900 90602912 IRF1 JASPAR yes 64190797
chr5 90602900 90602915 FOXP1 JASPAR yes 64190798
chr5 90602901 90602922 IRF1 JASPAR yes 64190799
chr5 90602902 90602922 RREB1 JASPAR yes 64190800
chr5 90602903 90602918 IRF9 JASPAR yes 64190801
chr5 90602905 90602917 IRF1 JASPAR yes 64190802
Genes associated with rs149900493[chr5:90602905], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More