EnhancerDB
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  3. rs149912230[chr19:13279960]
Enhancers that have rs149912230[chr19:13279960]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 13265805 13289518 enh17931
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs149912230[chr19:13279960]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 13279945 13279960 HNF4G JASPAR yes 112515206
chr19 13279945 13279960 LEF1 JASPAR yes 112515207
chr19 13279946 13279960 TCF7L2 JASPAR yes 112515208
Genes associated with rs149912230[chr19:13279960], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More