EnhancerDB
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  3. rs149975964[chr12:52612612]
Enhancers that have rs149975964[chr12:52612612]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52591245 52620175 enh14727
Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs149975964[chr12:52612612]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52612601 52612616 JUND JASPAR yes 120929633
chr12 52612602 52612615 JUN JASPAR yes 120929634
chr12 52612605 52612615 POU6F2 JASPAR yes 120929635
chr12 52612607 52612623 POU4F2 JASPAR yes 120929636
chr12 52612607 52612623 POU4F3 JASPAR yes 120929637
chr12 52612608 52612623 FOXA1 JASPAR yes 120929638
chr12 52612609 52612613 YY1 TRANSFAC yes 120929639
chr12 52612609 52612623 POU4F1 JASPAR yes 120929640
chr12 52612610 52612622 FOXC2 JASPAR yes 120929641
chr12 52612610 52612624 FOXF2 JASPAR yes 120929642
chr12 52612610 52612624 ONECUT3 JASPAR yes 120929643
chr12 52612611 52612622 FOXB1 JASPAR yes 120929644
chr12 52612611 52612622 FOXC1 JASPAR yes 120929645
chr12 52612612 52612616 YY1 TRANSFAC yes 120929646
chr12 52612612 52612623 FOXA1 JASPAR yes 120929647
Genes associated with rs149975964[chr12:52612612], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More