EnhancerDB
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  3. rs150030656[chr1:231542060]
Enhancers that have rs150030656[chr1:231542060]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 231540925 231559675 enh985
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Astrocyte Stomach Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Pancreas (Panc1) Uterus Heart
Transcript factors that have rs150030656[chr1:231542060]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 231542058 231542073 HNF1A JASPAR yes 36089722
chr1 231542059 231542069 ESX1 JASPAR yes 36089723
chr1 231542059 231542069 GSX2 JASPAR yes 36089724
chr1 231542059 231542069 HOXB2 JASPAR yes 36089725
chr1 231542059 231542069 HOXB3 JASPAR yes 36089726
chr1 231542059 231542069 LHX6 JASPAR yes 36089727
chr1 231542059 231542069 MEOX2 JASPAR yes 36089728
chr1 231542059 231542069 MNX1 JASPAR yes 36089729
chr1 231542059 231542069 POU6F1 JASPAR yes 36089730
chr1 231542059 231542069 RAX JASPAR yes 36089731
chr1 231542059 231542071 HNF1B JASPAR yes 36089732
chr1 231542059 231542072 HNF1B JASPAR yes 36089733
chr1 231542059 231542073 POU4F1 JASPAR yes 36089734
chr1 231542059 231542075 POU4F3 JASPAR yes 36089735
chr1 231542060 231542068 LMX1A JASPAR yes 36089736
chr1 231542060 231542068 LMX1B JASPAR yes 36089737
chr1 231542060 231542068 NKX6-1 JASPAR yes 36089738
chr1 231542060 231542068 NKX6-2 JASPAR yes 36089739
chr1 231542060 231542068 VAX1 JASPAR yes 36089740
chr1 231542060 231542068 VAX2 JASPAR yes 36089741
chr1 231542060 231542068 VSX1 JASPAR yes 36089742
chr1 231542060 231542068 VSX2 JASPAR yes 36089743
Genes associated with rs150030656[chr1:231542060], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More