EnhancerDB
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  3. rs150050836[chr5:150462248]
Enhancers that have rs150050836[chr5:150462248]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 150446018 150466235 enh22725
Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Heart
chr5 150461516 150462400 vista49693
VISTA
Transcript factors that have rs150050836[chr5:150462248]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 150462243 150462261 IRF2 JASPAR yes 66911225
chr5 150462243 150462261 IRF2 JASPAR yes 70740623
chr5 150462246 150462261 PRDM1 JASPAR yes 66911226
chr5 150462246 150462261 STAT2 JASPAR yes 66911227
chr5 150462246 150462261 PRDM1 JASPAR yes 70740624
chr5 150462246 150462261 STAT2 JASPAR yes 70740625
chr5 150462247 150462261 STAT1 JASPAR yes 66911228
chr5 150462247 150462261 STAT1 JASPAR yes 70740626
chr5 150462248 150462260 IRF1 JASPAR yes 66911229
chr5 150462248 150462260 IRF1 JASPAR yes 70740627
Genes associated with rs150050836[chr5:150462248], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More