EnhancerDB
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  3. rs150079891[chr1:25053520]
Enhancers that have rs150079891[chr1:25053520]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 25026945 25066186 enh139
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs150079891[chr1:25053520]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 25053508 25053521 SCRT2 JASPAR yes 27523725
chr1 25053508 25053523 SCRT1 JASPAR yes 27523726
chr1 25053512 25053521 SNAI2 JASPAR yes 27523727
chr1 25053512 25053522 FIGLA JASPAR yes 27523728
chr1 25053512 25053522 ID4 JASPAR yes 27523729
chr1 25053512 25053522 MSC JASPAR yes 27523730
chr1 25053512 25053522 MYF6 JASPAR yes 27523731
chr1 25053512 25053522 TCF3 JASPAR yes 27523732
chr1 25053512 25053522 TCF4 JASPAR yes 27523733
chr1 25053514 25053523 ZEB1 JASPAR yes 27523734
chr1 25053515 25053523 TBX5 JASPAR yes 27523735
Genes associated with rs150079891[chr1:25053520], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More