EnhancerDB
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  3. rs150090116[chr1:27461464]
Enhancers that have rs150090116[chr1:27461464]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27456674 27477960 enh171
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs150090116[chr1:27461464]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27461458 27461468 SREBF2 JASPAR yes 27680200
chr1 27461458 27461469 USF1 JASPAR yes 27680201
chr1 27461458 27461469 USF2 JASPAR yes 27680202
Genes associated with rs150090116[chr1:27461464], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More