EnhancerDB
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  3. rs150131466[chr2:25517853]
Enhancers that have rs150131466[chr2:25517853]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 25506105 25541255 enh18357
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Esophagus Placenta Breast Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
chr2 25517596 25517908 vista30725
VISTA
Transcript factors that have rs150131466[chr2:25517853]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 25517648 25517934 RUNX3 UCSC Txn Factor no Conserved 108431383
chr2 25517776 25518295 EBF1 UCSC Txn Factor no Conserved 108431384
chr2 25517776 25518295 EBF1 UCSC Txn Factor no Conserved 108431385
chr2 25517806 25518515 POLR2A UCSC Txn Factor no Conserved 108431386
chr2 25517806 25518515 POLR2A UCSC Txn Factor no Conserved 108431387
chr2 25517852 25517867 HNF1A JASPAR yes 22019901
chr2 25517852 25517867 HNF1A JASPAR yes 72463034
chr2 25517853 25517866 HNF1B JASPAR yes 22019902
chr2 25517853 25517866 HNF1B JASPAR yes 72463035
Genes associated with rs150131466[chr2:25517853], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More