EnhancerDB
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  3. rs150142741[chr1:178626500]
Enhancers that have rs150142741[chr1:178626500]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 178606845 178636895 enh759
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Large Intestine Ovary Esophagus Astrocyte Blood (OCI-LY7) Stomach Placenta Blood (Karpas-422) Lung (PC-9) Spleen Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs150142741[chr1:178626500]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 178626492 178626504 TFAP2A JASPAR yes 33434593
chr1 178626492 178626504 TFAP2B JASPAR yes 33434594
chr1 178626492 178626504 TFAP2C JASPAR yes 33434595
chr1 178626492 178626507 TFAP2A JASPAR yes 33434596
chr1 178626492 178626507 TFAP2C JASPAR yes 33434597
chr1 178626493 178626504 TFAP2A JASPAR yes 33434598
chr1 178626493 178626504 TFAP2B JASPAR yes 33434599
chr1 178626493 178626504 TFAP2C JASPAR yes 33434600
chr1 178626494 178626503 TFAP2A JASPAR yes 33434601
Genes associated with rs150142741[chr1:178626500], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More