EnhancerDB
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  3. rs150177852[chr1:218632681]
Enhancers that have rs150177852[chr1:218632681]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 218626305 218642655 enh27510
Brain (SK-N-MC) Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs150177852[chr1:218632681]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 218632650 218633246 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21380756
chr1 218632675 218632689 GATA2 JASPAR yes 35381310
chr1 218632679 218632687 GATA3 JASPAR yes 35381311
chr1 218632679 218632687 GATA5 JASPAR yes 35381312
Genes associated with rs150177852[chr1:218632681], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More