EnhancerDB
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  3. rs150268684[chr1:201427904]
Enhancers that have rs150268684[chr1:201427904]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201414985 201433510 enh875
Brain (SK-N-MC) Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs150268684[chr1:201427904]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 201427748 201428055 ZNF143 GTRD no Epithelial (MCF-7) 21364078
chr1 201427850 201428889 ZNF143 GTRD no Epithelial (MCF-7) 21364079
chr1 201427902 201427911 PITX3 JASPAR yes 34495954
chr1 201427902 201427912 GSC2 JASPAR yes 34495955
chr1 201427902 201427912 GSC JASPAR yes 34495956
chr1 201427903 201427911 OTX1 JASPAR yes 34495957
Genes associated with rs150268684[chr1:201427904], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More