EnhancerDB
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  3. rs150272359[chr1:28747962]
Enhancers that have rs150272359[chr1:28747962]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 28732865 28757735 enh186
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Astrocyte Blood (GM12878) Stomach Muscle (A673) Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs150272359[chr1:28747962]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 28747944 28747963 RFX2 JASPAR yes 27769190
chr1 28747948 28747964 RFX2 JASPAR yes 27769191
chr1 28747948 28747964 RFX3 JASPAR yes 27769192
chr1 28747948 28747964 RFX4 JASPAR yes 27769193
chr1 28747948 28747964 RFX5 JASPAR yes 27769194
chr1 28747949 28747968 RFX2 JASPAR yes 27769195
chr1 28747959 28747962 MYB TRANSFAC yes 27769196
Genes associated with rs150272359[chr1:28747962], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More