EnhancerDB
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  3. rs150288377[chr12:52592462]
Enhancers that have rs150288377[chr12:52592462]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52591245 52620175 enh14727
Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
chr12 52592399 52592846 vista13461
VISTA
Transcript factors that have rs150288377[chr12:52592462]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52592231 52592607 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546606
chr12 52592231 52592607 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108033582
chr12 52592318 52592582 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546607
chr12 52592318 52592582 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108033583
chr12 52592453 52592467 STAT1 JASPAR yes 82406325
chr12 52592453 52592467 STAT1 JASPAR yes 120926728
chr12 52592453 52592468 PRDM1 JASPAR yes 82406326
chr12 52592453 52592468 STAT2 JASPAR yes 82406327
chr12 52592453 52592468 PRDM1 JASPAR yes 120926729
chr12 52592453 52592468 STAT2 JASPAR yes 120926730
Genes associated with rs150288377[chr12:52592462], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More