EnhancerDB
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  3. rs150346129[chr1:19261234]
Enhancers that have rs150346129[chr1:19261234]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19252691 19280920 enh11566
Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs150346129[chr1:19261234]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19261227 19261237 HOXC10 JASPAR yes 27163009
chr1 19261227 19261237 HOXD11 JASPAR yes 27163010
chr1 19261227 19261238 HOXC11 JASPAR yes 27163011
chr1 19261227 19261238 HOXC12 JASPAR yes 27163012
chr1 19261227 19261238 HOXC13 JASPAR yes 27163013
chr1 19261227 19261238 HOXD12 JASPAR yes 27163014
Genes associated with rs150346129[chr1:19261234], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More