EnhancerDB
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  3. rs150420709[chr17:40407882]
Enhancers that have rs150420709[chr17:40407882]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 40390345 40414201 enh4414
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Liver (HepG2) Heart
Transcript factors that have rs150420709[chr17:40407882]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 40407868 40407882 PLAG1 JASPAR yes 54290409
chr17 40407879 40407896 RARA JASPAR yes 54290413
Genes associated with rs150420709[chr17:40407882], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More