EnhancerDB
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  3. rs150440025[chr6:34575020]
Enhancers that have rs150440025[chr6:34575020]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 34574305 34581193 enh38949
Bone Marrow (K562) Astrocyte Colon (HCT116) Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs150440025[chr6:34575020]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 34575003 34575024 IRF1 JASPAR yes 101224313
chr6 34575005 34575020 IRF9 JASPAR yes 101224314
chr6 34575006 34575020 IRF7 JASPAR yes 101224315
chr6 34575007 34575022 STAT2 JASPAR yes 101224316
chr6 34575008 34575020 IRF1 JASPAR yes 101224317
chr6 34575017 34575032 STAT1 JASPAR yes 101224318
chr6 34575019 34575030 STAT1 JASPAR yes 101224319
chr6 34575019 34575030 STAT3 JASPAR yes 101224320
Genes associated with rs150440025[chr6:34575020], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More