EnhancerDB
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  3. rs150528576[chr1:55048754]
Enhancers that have rs150528576[chr1:55048754]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 55021705 55049987 enh11873
Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs150528576[chr1:55048754]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 55048743 55048762 RFX2 JASPAR yes 28995534
chr1 55048745 55048760 RFX5 JASPAR yes 28995535
chr1 55048747 55048763 RFX2 JASPAR yes 28995536
chr1 55048747 55048763 RFX3 JASPAR yes 28995537
chr1 55048747 55048763 RFX4 JASPAR yes 28995538
chr1 55048747 55048763 RFX5 JASPAR yes 28995539
chr1 55048748 55048767 RFX2 JASPAR yes 28995540
Genes associated with rs150528576[chr1:55048754], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More