EnhancerDB
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  3. rs150575988[chr6:42375272]
Enhancers that have rs150575988[chr6:42375272]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 42360825 42379595 enh9117
Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Lung (A549) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
chr6 42375139 42375533 vista51976
VISTA
Transcript factors that have rs150575988[chr6:42375272]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 42375225 42375517 RUNX3 UCSC Txn Factor no Conserved 108540261
chr6 42375261 42375272 PHOX2A JASPAR yes 70365211
chr6 42375261 42375272 PHOX2A JASPAR yes 101718606
chr6 42375267 42375275 HOXA5 JASPAR yes 70365212
chr6 42375267 42375275 HOXA5 JASPAR yes 101718607
Genes associated with rs150575988[chr6:42375272], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More