EnhancerDB
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  3. rs150588806[chr1:25052040]
Enhancers that have rs150588806[chr1:25052040]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 25026945 25066186 enh139
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs150588806[chr1:25052040]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 25052034 25052045 E2F1 JASPAR yes 27523549
chr1 25052035 25052040 SP1 TRANSFAC yes 27523550
chr1 25052035 25052046 E2F4 JASPAR yes 27523551
chr1 25052035 25052046 E2F6 JASPAR yes 27523552
chr1 25052036 25052041 SP1 TRANSFAC yes 27523553
chr1 25052039 25052044 ETS2 TRANSFAC yes 27523554
Genes associated with rs150588806[chr1:25052040], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More