EnhancerDB
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  3. rs150590416[chr1:52110197]
Enhancers that have rs150590416[chr1:52110197]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 52099919 52117655 enh11848
Bone Marrow (K562) Liver Colon (HCT116) Adrenal Uterus Stomach Brain (SK-N-SH) Ovary Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs150590416[chr1:52110197]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 52110167 52110712 ZNF274 GTRD no Bone Marrow (K562) 107803595
chr1 52110180 52110420 ZNF274 GTRD no Liver (HepG2) 107803596
chr1 52110186 52110630 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 107803597
chr1 52110190 52110201 CEBPB JASPAR yes 28858790
chr1 52110193 52110205 YY1 JASPAR yes 28858791
chr1 52110193 52110569 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107803598
Genes associated with rs150590416[chr1:52110197], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More